Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953245GATA binding protein 2a. (456 aa)    
Predicted Functional Partners:
zfpm1
Zinc finger protein, FOG family member 1.
    
 0.917
LOC106962496
Runt-related transcription factor.
    
 0.887
LOC106948963
T-cell acute lymphocytic leukemia 1.
   
 0.886
ENSPLAP00000022901
BHLH domain-containing protein.
   
 0.886
lmo2
LIM domain only 2 (rhombotin-like 1).
    
 0.866
LOC106946993
Spi-1 proto-oncogene b.
    
 0.833
LOC106942585
ETS domain-containing protein.
    
 0.833
ENSPLAP00000013976
Glutaredoxin 3.
    
 
 0.818
ENSPLAP00000028290
Uncharacterized protein.
    
 
 0.818
ENSPLAP00000013662
E1A binding protein p300 b.
    
 0.796
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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