STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM107Transmembrane protein 107 like. (140 aa)    
Predicted Functional Partners:
b9d1
B9 protein domain 1.
   
 
 0.675
TMEM216
Transmembrane protein 216.
   
 
 0.645
tmem231
Transmembrane protein 231.
   
 
 0.641
LOC106955831
Uncharacterized protein.
   
 
 0.563
LOC106959340
Transmembrane protein 237a.
   
 
 0.547
LOC106958027
Transmembrane protein 237b.
   
 
 0.547
ENSPLAP00000025238
Uncharacterized protein.
      
 0.541
nphp3
Nephronophthisis 3.
      
 0.521
cc2d2a
Coiled-coil and C2 domain containing 2A.
      
 0.520
rpgrip1l
RPGRIP1 like.
      
 0.495
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.