Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM107Transmembrane protein 107 like. (140 aa)    
Predicted Functional Partners:
b9d1
B9 protein domain 1.
   
 0.907
ENSPLAP00000025238
Uncharacterized protein.
     
 0.865
ENSPLAP00000027758
Uncharacterized protein.
    
 0.819
TMEM216
Transmembrane protein 216.
   
 
 0.789
tmem67
Transmembrane protein 67.
     
 0.789
tmem231
Transmembrane protein 231.
   
 
 0.786
tctn1
DUF1619 domain-containing protein.
     
 0.778
trip11
Thyroid hormone receptor interactor 11.
      
 0.720
nphp3
Nephronophthisis 3.
      
 0.708
rpgrip1l
RPGRIP1 like.
      
 0.685
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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