STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106939612Tetraspanin. (242 aa)    
Predicted Functional Partners:
LOC106935062
RAB3D, member RAS oncogene family, b.
      
 0.593
LOC106958767
DAN domain family, member 5.
      
 0.593
GOLM1
Golgi membrane protein 1.
      
 0.592
met
MET proto-oncogene, receptor tyrosine kinase.
   
  0.574
LOC106949456
Macrophage stimulating 1 receptor a.
   
  0.574
mst1r
Macrophage stimulating 1 receptor b.
   
  0.574
pdgfb
Platelet-derived growth factor beta polypeptide a; Belongs to the PDGF/VEGF growth factor family.
   
  0.439
ENSPLAP00000029046
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
   
  0.439
LOC106947212
Uncharacterized protein.
   
 
  0.422
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.