Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001744RRM domain-containing protein. (160 aa)    
Predicted Functional Partners:
LOC106940892
Uncharacterized protein.
  
 
   0.548
LOC106947206
Cytotoxic granule-associated RNA binding protein 1, like.
  
 
   0.537
tial1
TIA1 cytotoxic granule-associated RNA binding protein-like 1.
  
 
   0.532
cirbp
Cold inducible RNA binding protein b.
  
 
   0.506
mrpl30
Mitochondrial ribosomal protein L30.
    
   0.498
LOC106961338
RRM domain-containing protein.
  
   
 0.474
RBM38
RNA binding motif protein 38.
  
   
 0.471
ngrn
Neugrin, neurite outgrowth associated.
    
   0.469
mrrf
Mitochondrial ribosome recycling factor.
    
   0.466
TRA2B
Transformer 2 beta homolog.
  
 
   0.452
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.