Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
setbp1SET binding protein 1. (1512 aa)    
Predicted Functional Partners:
nek4
NIMA-related kinase 4.
    
 
 0.737
ENSPLAP00000020817
HARE-HTH domain-containing protein.
    
 
 0.726
LOC106956949
Lysine (K)-specific demethylase 6A, like.
  
 0.703
kdm6a
Lysine (K)-specific demethylase 6A.
  
 0.703
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
      
 0.683
LOC106949253
Lysine (K)-specific demethylase 6B, b.
  
 0.679
LOC106935492
Lysine (K)-specific demethylase 6B, a.
  
 0.679
MSL3
MSL complex subunit 3.
  
 
 0.673
phf6
PHD finger protein 6.
   
 
 0.655
cwf19l2
CWF19 like cell cycle control factor 2.
      
 0.655
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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