STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
setbp1SET binding protein 1. (1512 aa)    
Predicted Functional Partners:
setd2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.836
dot1l
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.808
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.772
rbbp5
Retinoblastoma binding protein 5.
    
 0.756
eed
Embryonic ectoderm development.
    
 0.753
MSL3
MSL complex subunit 3.
  
 
 0.743
LOC106952315
SUZ12 polycomb repressive complex 2 subunit b.
    
 0.716
LOC106957584
VEFS-Box domain-containing protein.
    
 0.716
LOC106956949
Lysine (K)-specific demethylase 6A, like.
  
 0.712
kdm6a
Lysine (K)-specific demethylase 6A.
  
 0.712
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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