STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106944133Glyco_hydro_38N domain-containing protein. (298 aa)    
Predicted Functional Partners:
ENSPLAP00000002620
Glyco_hydro_38C domain-containing protein.
 
     0.923
golga2
Golgin A2.
    
 
 0.807
cog3
Component of oligomeric golgi complex 3.
     
 0.614
LOC106948181
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.587
edem3
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.587
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
    
 
 0.561
LOC106963015
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family.
    
 
 0.560
fut8
Fucosyltransferase 8b (alpha (1,6) fucosyltransferase); Belongs to the glycosyltransferase 23 family.
    
 
 0.560
fkbp15
Peptidylprolyl isomerase.
    
 
 0.551
LOC106935006
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase b.
      
 0.547
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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