STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asb14Ankyrin repeat and SOCS box containing 14a. (579 aa)    
Predicted Functional Partners:
LOC106940681
Fleer.
    
 0.676
ift81
Intraflagellar transport 81 homolog.
    
 0.670
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.663
rps3
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.662
commd8
COMM domain containing 8.
   
  0.651
ift22
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.643
LOC106956567
COMM domain containing 4.
    
 0.601
LOC106938010
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.600
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.600
REL
REL proto-oncogene, NF-kB subunit.
   
 0.600
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.