Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
asb14Ankyrin repeat and SOCS box containing 14a. (579 aa)    
Predicted Functional Partners:
asb4
Ankyrin repeat and SOCS box containing 4.
  
 
0.696
LOC106940681
Fleer.
    
 0.688
cul2
Cullin 2; Belongs to the cullin family.
    
 0.627
iqub
IQ motif and ubiquitin domain containing.
   
 
 0.600
LOC106945123
Refilin A.
      
 0.578
commd1
Copper metabolism (Murr1) domain containing 1.
    
 0.568
ift81
Intraflagellar transport 81 homolog.
    
 0.512
cul5
Cullin 5; Belongs to the cullin family.
    
 0.503
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.503
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.500
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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