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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947988Uncharacterized protein. (952 aa)    
Predicted Functional Partners:
dnttip1
Ubiquitin-conjugating enzyme E2C.
    
 
 0.858
LOC106953718
ELM2 and Myb/SANT-like domain containing 1a.
    
 
0.616
elmsan1
ELM2 and Myb/SANT-like domain containing 1b.
    
 
0.616
ccdc51
Coiled-coil domain containing 51.
      
 0.556
LOC106961683
Uncharacterized protein.
  
 
   0.539
ENSPLAP00000002653
Uncharacterized protein.
  
 
 
 0.520
ENSPLAP00000004599
Uncharacterized protein.
      
 0.499
LOC106950587
Uncharacterized protein.
  
   
 0.494
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.485
LOC106963108
Si:ch211-168f7.5.
  
     0.470
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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