Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abitramActin binding transcription modulator. (180 aa)    
Predicted Functional Partners:
pus10
Pseudouridine synthase 10.
    
   0.956
wdyhv1
WDYHV motif containing 1.
      
 0.869
sla
Src like adaptor 1a.
   
  
 0.720
frrs1l
Ferric-chelate reductase 1-like.
      
 0.718
gpn3
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
   
    0.704
LOC106941040
Hydroxysteroid dehydrogenase like 1.
      
 0.683
elp2
Elongator acetyltransferase complex subunit 2.
      
 0.682
armc1
Armadillo repeat-containing protein 1.
      
 0.681
LOC106938690
Armadillo repeat-containing protein 1.
      
 0.681
mrps21
Mitochondrial ribosomal protein S21.
   
    0.668
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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