Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
tma7Translation machinery associated 7 homolog. (64 aa)    
Predicted Functional Partners:
LOC106955741
Ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 
 0.977
snrpg
Small nuclear ribonucleoprotein G.
   
  
 0.961
rps21
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  
 0.943
UBL5
Ubiquitin like 5.
   
    0.919
TOMM7
Translocase of outer mitochondrial membrane 7.
   
  
 0.918
rpl37
Ribosomal protein L37; Binds to the 23S rRNA.
   
  
 0.914
endog
Endonuclease.
    
   0.904
LOC106941529
Cytochrome c oxidase subunit 7C.
   
    0.897
rps26
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
  
 0.876
atp5f1e
ATP synthase F1 subunit epsilon.
   
    0.867
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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