Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR37WD repeat domain 37. (494 aa)    
Predicted Functional Partners:
pacs2
Phosphofurin acidic cluster sorting protein 2.
    
 
 0.954
PACS1
Phosphofurin acidic cluster sorting protein 1a.
    
 
 0.926
ENSPLAP00000004932
Uncharacterized protein.
    
 
 0.924
ENSPLAP00000017136
Uncharacterized protein.
    
 0.774
sgf29
SAGA complex associated factor 29.
    
 0.769
ENSPLAP00000015194
WD_REPEATS_REGION domain-containing protein.
    
 0.769
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.750
wdr48
WD repeat domain 48b.
    
 0.723
armc8
Armadillo repeat containing 8.
   
 
 0.711
lrrc45
Leucine rich repeat containing 45.
    
 
 0.672
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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