Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSPLAP00000001786RRM domain-containing protein. (133 aa)    
Predicted Functional Partners:
LOC106953185
RRM domain-containing protein.
   
 
 0.733
LOC106965063
RRM domain-containing protein.
   
 
 0.733
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
    
 
 0.552
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
    
 
 0.552
psmd10
Proteasome 26S subunit, non-ATPase 10.
    
 
 0.533
LOC106947170
RRM domain-containing protein.
    
 
 0.532
ralyl
RRM domain-containing protein.
    
 
 0.532
LOC106963330
Notch receptor 1a.
    
   0.517
LOC106954293
Notch receptor 1b.
    
   0.517
LOC106942046
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
    
   0.491
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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