STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001787Sema domain-containing protein. (412 aa)    
Predicted Functional Partners:
LOC106943403
Plexin A3.
 
     0.773
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.754
LOC106944010
Plexin_cytopl domain-containing protein.
 
      0.752
sema4d
Uncharacterized protein; Belongs to the semaphorin family.
    
 0.709
LOC106949677
Si:ch211-129c21.1; Belongs to the semaphorin family.
    
 0.709
LOC106951432
Semaphorin 4e; Belongs to the semaphorin family.
    
 0.709
ENSPLAP00000029964
Sema domain-containing protein; Belongs to the semaphorin family.
    
 0.709
LOC106960293
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
 0.697
LOC106946273
Uncharacterized protein.
    
 0.697
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.697
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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