STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106954565Si:dkey-19b23.8. (225 aa)    
Predicted Functional Partners:
LOC106959286
Low density lipoprotein receptor b.
    
  0.936
ldlr
Low density lipoprotein receptor a.
    
  0.936
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
     
 
0.900
ENSPLAP00000028678
Low density lipoprotein receptor adaptor protein 1a.
     
  0.900
dab2
DAB adaptor protein 2.
     
  0.838
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
   0.773
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.773
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
      
 0.709
ABHD5
Abhydrolase domain containing 5.
      
 0.680
LOC106954136
Intersectin 2b.
    
  0.612
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.