Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC106939604R3H domain containing 2. (1055 aa)    
Predicted Functional Partners:
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.615
LOC106952884
RNA polymerase I and III subunit D.
    
 
 0.595
LOC106962276
Uncharacterized protein.
    
 
 0.581
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.581
LOC106953251
Ubiquinol-cytochrome c reductase core protein 1.
    
   0.523
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
    
   0.523
LOC106956929
Ubiquinol-cytochrome c reductase core protein 2a.
    
   0.522
LOC106961728
Ubiquinol-cytochrome c reductase core protein 2b.
    
   0.522
emg1
EMG1 N1-specific pseudouridine methyltransferase.
    
   0.451
gpn3
GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family.
      
 0.436
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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