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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953978Uncharacterized protein. (768 aa)    
Predicted Functional Partners:
ctnnbip1
Catenin, beta interacting protein 1.
    
 0.995
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.987
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.986
apc2
APC regulator of WNT signaling pathway 2.
   
 0.986
axin1
Axin 1.
    
 0.985
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.985
lef1
Lymphoid enhancer-binding factor 1.
    
 0.984
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
   
 0.981
egfr
Receptor protein-tyrosine kinase.
    
 0.978
LOC106959222
Uncharacterized protein.
    
 0.976
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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