Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953978Uncharacterized protein. (768 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
   
 0.994
ctnnbip1
Catenin, beta interacting protein 1.
    
 0.992
apc2
APC regulator of WNT signaling pathway 2.
   
 0.992
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
   
 0.991
fbxw11
F-box and WD repeat domain containing 11b.
    
 0.989
LOC106959222
Uncharacterized protein.
    
 0.988
AXIN2
Axin 2.
    
 0.988
axin1
Axin 1.
    
 0.988
LOC106957085
Axin 2 (conductin, axil).
    
 0.988
gsk3b
Glycogen synthase kinase 3 beta, genome duplicate a; Belongs to the protein kinase superfamily.
    
 0.987
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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