STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106947980Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
LOC106945789
J domain-containing protein.
    
 
 0.633
mospd1
Motile sperm domain containing 1.
   
 0.621
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
   
 0.621
vapb
MSP domain-containing protein.
   
 0.621
LOC106960241
VAMP (vesicle-associated membrane protein)-associated protein B and C.
   
 0.621
lman1
Lectin, mannose-binding, 1.
    
 0.619
stx5
Syntaxin 5A; Belongs to the syntaxin family.
     
 0.551
LOC106959863
Mitofusin 1b; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.485
mfn2
Mitofusin 2; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.485
ENSPLAP00000030011
Fzo_mitofusin domain-containing protein.
   
 
 0.485
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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