LOC106952620 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC106952620

Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily. (363 aa)

Predicted Functional Partners:

nme5

0.730

chp1

0.727

btg1

0.596

card14

0.579

hyi

0.577

ENSPLAP00000014192

0.577

LOC106937081

0.566

naa60

0.546

iqca1

0.544

sec61g

0.541

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000014192	LOC106952620	ENSPLAP00000014192	ENSPLAP00000001832	NDK domain-containing protein.	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	0.577
ENSPLAP00000014192	card14	ENSPLAP00000014192	ENSPLAP00000018443	NDK domain-containing protein.	Caspase recruitment domain family, member 14.	0.443
ENSPLAP00000014192	chp1	ENSPLAP00000014192	ENSPLAP00000018524	NDK domain-containing protein.	Calcineurin-like EF-hand protein 1.	0.527
ENSPLAP00000014192	iqca1	ENSPLAP00000014192	ENSPLAP00000009990	NDK domain-containing protein.	IQ motif containing with AAA domain 1.	0.888
ENSPLAP00000014192	nme5	ENSPLAP00000014192	ENSPLAP00000023829	NDK domain-containing protein.	NME/NM23 family member 5; Belongs to the NDK family.	0.520
LOC106937081	LOC106952620	ENSPLAP00000025855	ENSPLAP00000001832	Zgc:55781.	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	0.566
LOC106937081	hyi	ENSPLAP00000025855	ENSPLAP00000000385	Zgc:55781.	Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family.	0.683
LOC106937081	sec61g	ENSPLAP00000025855	ENSPLAP00000030144	Zgc:55781.	SEC61 translocon gamma subunit.	0.720
LOC106952620	ENSPLAP00000014192	ENSPLAP00000001832	ENSPLAP00000014192	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	NDK domain-containing protein.	0.577
LOC106952620	LOC106937081	ENSPLAP00000001832	ENSPLAP00000025855	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	Zgc:55781.	0.566
LOC106952620	btg1	ENSPLAP00000001832	ENSPLAP00000017027	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	B-cell translocation gene 1, anti-proliferative.	0.596
LOC106952620	card14	ENSPLAP00000001832	ENSPLAP00000018443	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	Caspase recruitment domain family, member 14.	0.579
LOC106952620	chp1	ENSPLAP00000001832	ENSPLAP00000018524	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	Calcineurin-like EF-hand protein 1.	0.727
LOC106952620	hyi	ENSPLAP00000001832	ENSPLAP00000000385	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	Putative hydroxypyruvate isomerase; Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde); Belongs to the hyi family.	0.577
LOC106952620	iqca1	ENSPLAP00000001832	ENSPLAP00000009990	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	IQ motif containing with AAA domain 1.	0.544
LOC106952620	naa60	ENSPLAP00000001832	ENSPLAP00000022687	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	N-acetyltransferase 15 (GCN5-related, putative).	0.546
LOC106952620	nme5	ENSPLAP00000001832	ENSPLAP00000023829	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	NME/NM23 family member 5; Belongs to the NDK family.	0.730
LOC106952620	sec61g	ENSPLAP00000001832	ENSPLAP00000030144	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	SEC61 translocon gamma subunit.	0.541
btg1	LOC106952620	ENSPLAP00000017027	ENSPLAP00000001832	B-cell translocation gene 1, anti-proliferative.	Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily.	0.596
card14	ENSPLAP00000014192	ENSPLAP00000018443	ENSPLAP00000014192	Caspase recruitment domain family, member 14.	NDK domain-containing protein.	0.443