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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106952620Serine/threonine kinase 17a like; Belongs to the protein kinase superfamily. (363 aa)    
Predicted Functional Partners:
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
  
 
0.656
pla2g4a
Phospholipase A2.
    
 0.622
ripk4
Receptor-interacting serine-threonine kinase 4.
    
0.580
nme5
NME/NM23 family member 5; Belongs to the NDK family.
    
 
 0.566
chek2
Checkpoint kinase 2.
  
 
0.550
camkk1
Calcium/calmodulin-dependent protein kinase kinase 1, alpha a.
  
 
0.545
SLC39A1
Solute carrier family 39 member 1.
    
 0.544
SLC39A3
Solute carrier family 39 member 3.
    
 0.544
LOC106934385
Solute carrier family 39 member 1.
    
 0.544
LOC106952794
Calcium/calmodulin-dependent protein kinase kinase 1, alpha b; Belongs to the protein kinase superfamily.
  
 
0.536
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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