Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C1QAComplement C1q A chain. (257 aa)    
Predicted Functional Partners:
LOC106950009
Complement C1q C chain.
  
0.994
scarf1
Scavenger receptor class F, member 1.
     
 0.926
C1QB
Complement C1q B chain.
  
 
0.922
megf11
Multiple EGF-like-domains 11.
     
  0.904
LOC106936274
Calreticulin.
     
  0.900
LOC106951082
Calreticulin.
     
  0.900
LOC106955356
Low density lipoprotein receptor-related protein 1Ab.
     
  0.900
LOC106950604
Low density lipoprotein receptor-related protein 1Aa.
     
  0.900
ENSPLAP00000021668
Uncharacterized protein; Belongs to the peptidase S1 family.
   
 
 0.702
LOC106947355
Serpin peptidase inhibitor, clade G (C1 inhibitor), member 1; Belongs to the serpin family.
    
 0.578
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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