Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl3Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family. (344 aa)    
Predicted Functional Partners:
mrpl12
Mitochondrial ribosomal protein L12.
  
 0.998
mrpl4
Mitochondrial ribosomal protein L4.
  
 0.998
mrpl13
Mitochondrial ribosomal protein L13.
  
 0.997
mrpl9
Mitochondrial ribosomal protein L9.
  
 0.996
ENSPLAP00000025826
Mitochondrial ribosomal protein L21.
  
 0.996
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 0.995
mrpl19
Mitochondrial ribosomal protein L19.
  
 0.995
mrpl2
Mitochondrial ribosomal protein L2.
  
 0.995
mrpl47
Mitochondrial ribosomal protein L47.
   
 0.994
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 0.994
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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