Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SPSB1SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.907
cul5
Cullin 5; Belongs to the cullin family.
    
 0.866
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.866
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.799
mycbp2
MYC binding protein 2.
    
 
 0.797
pawr
PRKC, apoptosis, WT1, regulator.
    
   0.764
spsb3
SplA/ryanodine receptor domain and SOCS box containing 3a.
     
 0.758
rnf7
Ring finger protein 7.
    
 0.750
ELOB
Elongin B.
    
 0.732
LOC106961099
Elongin B.
    
 0.732
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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