Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
LOC106959930Doublecortin-like kinase 1b. (722 aa)    
Predicted Functional Partners:
dcx
Uncharacterized protein.
   
 
 0.941
pot1
Telo_bind domain-containing protein.
    
 
 0.781
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.698
tert
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 
 0.615
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
    
 
 0.593
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
    
 
 0.593
efnb2
Ephrin RBD domain-containing protein; Belongs to the ephrin family.
   
  
 0.591
ENSPLAP00000008509
Ephrin-B3a.
   
  
 0.591
LOC106935973
Ephrin-B2a; Belongs to the ephrin family.
   
  
 0.591
ENSPLAP00000019789
Ephrin-B1; Belongs to the ephrin family.
   
  
 0.591
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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