Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
romo1Reactive oxygen species modulator 1. (79 aa)    
Predicted Functional Partners:
timm21
Translocase of inner mitochondrial membrane 21.
    
 0.971
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
    0.967
timm17a
Mitochondrial import inner membrane translocase subunit TIM17; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.957
timm17b
Translocase of inner mitochondrial membrane 17 homolog B (yeast).
   
 0.957
timm23
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
    
 0.954
ndufb7
NADH:ubiquinone oxidoreductase subunit B7.
   
 
 0.929
LOC106949375
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
  
 0.896
LOC106942524
Presequence translocase associated motor 16.
   
 
 0.882
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  
 0.874
polr2l
Polymerase (RNA) II (DNA directed) polypeptide L.
   
  
 0.866
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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