Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASTE1Asteroid homolog 1. (673 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
 0.689
tubgcp2
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
      
 0.682
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
      
 0.677
LOC106953558
Uncharacterized protein.
      
 0.643
tmem108
Transmembrane protein 108.
      
 0.642
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.641
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.618
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
    
 0.613
LOC106941750
Survival of motor neuron 1, telomeric.
    
 0.580
POC1A
POC1 centriolar protein A.
    
 0.574
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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