STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pou1f1POU domain protein. (341 aa)    
Predicted Functional Partners:
crebbp
CREB binding protein a.
    
 0.712
LOC106942609
CREB binding protein b.
    
 0.712
ENSPLAP00000012870
Uncharacterized protein.
    
  0.702
ENSPLAP00000013662
E1A binding protein p300 b.
    
 0.687
ENSPLAP00000004599
Uncharacterized protein.
    
 
 0.653
gtf2b
General transcription factor IIB.
    
  0.626
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
    
  0.615
LOC106959458
Homeobox domain-containing protein.
    
 
 0.615
LOC106959757
Prolactin 2.
   
  
 0.608
LOC106939759
Prolactin.
   
  
 0.608
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.