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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106938036Serine/threonine kinase 3 (STE20 homolog, yeast). (503 aa)    
Predicted Functional Partners:
LOC106964610
LIM zinc-binding domain-containing protein.
    
 0.973
sav1
Salvador family WW domain containing protein 1.
    
 0.972
LOC106961886
MOB kinase activator 1A.
   
 0.962
casp3
Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family.
   
  0.939
RASSF5
Ras association domain family member 5.
    
 0.925
CASP3
Caspase 3; Belongs to the peptidase C14A family.
   
  0.925
yap1
Yes-associated protein 1.
    
 0.919
LOC106954924
Si:dkey-266m15.5.
   
 0.909
LOC106939673
Uncharacterized protein.
  
  
 
0.896
stk3
Protein kinase domain-containing protein.
  
  
 
0.896
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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