STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP000000018964.1m domain-containing protein. (140 aa)    
Predicted Functional Partners:
LOC106934504
LAM_G_DOMAIN domain-containing protein.
 
      0.897
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.777
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.777
ENSPLAP00000020760
Leucine rich repeat transmembrane neuronal 2.
    
 0.707
LOC106945523
Neuroligin 1.
    
 0.703
nrxn3
Uncharacterized protein.
 
      0.691
ENSPLAP00000000225
Neurexin 1.
 
      0.687
LOC106957160
Neurexin 3b.
 
      0.682
ENSPLAP00000013225
Uncharacterized protein.
 
      0.680
ENSPLAP00000027696
Uncharacterized protein.
 
      0.676
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.