Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001901Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.979
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.974
cct3
T-complex protein 1 subunit gamma.
    
   0.974
tcp1
T-complex 1.
    
   0.974
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.935
LOC106950570
MOB family member 4, phocein.
    
 
 0.922
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 
 0.916
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.911
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
   0.909
strip1
Striatin interacting protein 1.
    
 
 0.867
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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