STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001901Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.958
cct5
Chaperonin containing TCP1, subunit 5 (epsilon).
    
   0.954
cct3
T-complex protein 1 subunit gamma.
    
   0.954
tcp1
T-complex 1.
    
   0.954
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.944
LOC106950570
MOB family member 4, phocein.
    
 
 0.935
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 0.923
cct8
Chaperonin containing TCP1, subunit 8 (theta).
    
   0.920
sike1
Suppressor of IKBKE 1.
    
 
 0.876
strip1
Striatin interacting protein 1.
    
 
 0.859
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.