Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
blcapBladder cancer associated protein. (87 aa)    
Predicted Functional Partners:
psmf1
Proteasome inhibitor subunit 1.
      
 0.721
ASTN2
Astrotactin 2.
      
 0.721
ints1
Integrator complex subunit 1.
      
 0.718
znf618
Zinc finger protein 618.
      
 0.718
HDAC2
Histone deacetylase 2; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
      
 0.682
cog3
Component of oligomeric golgi complex 3.
      
 0.682
ENSPLAP00000019006
Cellular communication network factor 6.
      
 0.682
asb4
Ankyrin repeat and SOCS box containing 4.
      
 0.665
zfat
Zinc finger and AT hook domain containing.
      
 0.663
LOC106935082
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.650
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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