STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blcapBladder cancer associated protein. (87 aa)    
Predicted Functional Partners:
LOC106935082
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.540
ints1
Integrator complex subunit 1.
      
 0.535
cog3
Component of oligomeric golgi complex 3.
      
 0.513
fancc
FA complementation group C.
      
 0.480
adar
Adenosine deaminase RNA specific.
      
 0.437
asb4
Ankyrin repeat and SOCS box containing 4.
      
 0.416
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.