Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ENSPLAP00000001918PTB domain-containing protein. (267 aa)    
Predicted Functional Partners:
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.794
LOC106956946
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.794
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
      
 0.673
fcsk
Fucose kinase.
      
 0.642
vac14
Vac14 homolog (S. cerevisiae).
      
 0.641
cog4
Component of oligomeric golgi complex 4.
      
 0.634
rpl21
Ribosomal protein L21.
      
 0.614
ush1c
Usher syndrome 1C.
   
 
 0.594
sf3b3
Splicing factor 3b, subunit 3.
      
 0.533
tsr2
TSR2 ribosome maturation factor.
      
 0.521
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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