ENSPLAP00000001939 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000001939

Si:dkey-85n7.8. (97 aa)

Predicted Functional Partners:

LOC106948495

0.681

ENSPLAP00000029624

0.681

LOC106951238

0.537

LOC106934456

0.537

LOC106951332

0.509

LOC106948657

0.509

LOC106937091

0.509

LOC106941529

0.509

LOC106951822

0.509

LOC106952680

0.492

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000001939	ENSPLAP00000029624	ENSPLAP00000001939	ENSPLAP00000029624	Si:dkey-85n7.8.	Uncharacterized protein.	0.681
ENSPLAP00000001939	LOC106934456	ENSPLAP00000001939	ENSPLAP00000004948	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 4I2.	0.537
ENSPLAP00000001939	LOC106937091	ENSPLAP00000001939	ENSPLAP00000010119	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 7A1.	0.509
ENSPLAP00000001939	LOC106941529	ENSPLAP00000001939	ENSPLAP00000014484	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 7C.	0.509
ENSPLAP00000001939	LOC106948495	ENSPLAP00000001939	ENSPLAP00000002881	Si:dkey-85n7.8.	Uncharacterized protein.	0.681
ENSPLAP00000001939	LOC106948657	ENSPLAP00000001939	ENSPLAP00000000642	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 7A2 like.	0.509
ENSPLAP00000001939	LOC106951238	ENSPLAP00000001939	ENSPLAP00000001042	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 4I1.	0.537
ENSPLAP00000001939	LOC106951332	ENSPLAP00000001939	ENSPLAP00000000489	Si:dkey-85n7.8.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.509
ENSPLAP00000001939	LOC106951822	ENSPLAP00000001939	ENSPLAP00000022403	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 7A2.	0.509
ENSPLAP00000001939	LOC106952680	ENSPLAP00000001939	ENSPLAP00000017650	Si:dkey-85n7.8.	Cytochrome c oxidase subunit 5B2.	0.492
ENSPLAP00000029624	ENSPLAP00000001939	ENSPLAP00000029624	ENSPLAP00000001939	Uncharacterized protein.	Si:dkey-85n7.8.	0.681
ENSPLAP00000029624	LOC106934456	ENSPLAP00000029624	ENSPLAP00000004948	Uncharacterized protein.	Cytochrome c oxidase subunit 4I2.	0.963
ENSPLAP00000029624	LOC106937091	ENSPLAP00000029624	ENSPLAP00000010119	Uncharacterized protein.	Cytochrome c oxidase subunit 7A1.	0.827
ENSPLAP00000029624	LOC106941529	ENSPLAP00000029624	ENSPLAP00000014484	Uncharacterized protein.	Cytochrome c oxidase subunit 7C.	0.977
ENSPLAP00000029624	LOC106948495	ENSPLAP00000029624	ENSPLAP00000002881	Uncharacterized protein.	Uncharacterized protein.	0.627
ENSPLAP00000029624	LOC106948657	ENSPLAP00000029624	ENSPLAP00000000642	Uncharacterized protein.	Cytochrome c oxidase subunit 7A2 like.	0.932
ENSPLAP00000029624	LOC106951238	ENSPLAP00000029624	ENSPLAP00000001042	Uncharacterized protein.	Cytochrome c oxidase subunit 4I1.	0.963
ENSPLAP00000029624	LOC106951332	ENSPLAP00000029624	ENSPLAP00000000489	Uncharacterized protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.911
ENSPLAP00000029624	LOC106951822	ENSPLAP00000029624	ENSPLAP00000022403	Uncharacterized protein.	Cytochrome c oxidase subunit 7A2.	0.698
ENSPLAP00000029624	LOC106952680	ENSPLAP00000029624	ENSPLAP00000017650	Uncharacterized protein.	Cytochrome c oxidase subunit 5B2.	0.956