rdm1 protein (Poecilia latipinna) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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co-expression

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[Homology]

Score

rdm1

Zgc:103564. (271 aa)

Predicted Functional Partners:

rad52

0.734

LOC106964456

0.721

dnajc12

0.686

LOC106945096

0.672

ENSPLAP00000015739

0.642

AMZ2

0.629

pi4kb

0.627

LOC106941236

0.627

ruvbl2

0.606

daw1

0.550

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMZ2	LOC106945096	ENSPLAP00000031169	ENSPLAP00000009148	Archaelysin family metallopeptidase 2.	FAST kinase domains 3.	0.588
AMZ2	dnajc12	ENSPLAP00000031169	ENSPLAP00000022746	Archaelysin family metallopeptidase 2.	DnaJ (Hsp40) homolog, subfamily C, member 12.	0.637
AMZ2	rdm1	ENSPLAP00000031169	ENSPLAP00000001942	Archaelysin family metallopeptidase 2.	Zgc:103564.	0.629
ENSPLAP00000015739	daw1	ENSPLAP00000015739	ENSPLAP00000025412	Transmembrane protein 72.	WD_REPEATS_REGION domain-containing protein.	0.510
ENSPLAP00000015739	rdm1	ENSPLAP00000015739	ENSPLAP00000001942	Transmembrane protein 72.	Zgc:103564.	0.642
LOC106941236	pi4kb	ENSPLAP00000021948	ENSPLAP00000016124	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	0.901
LOC106941236	rdm1	ENSPLAP00000021948	ENSPLAP00000001942	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	Zgc:103564.	0.627
LOC106945096	AMZ2	ENSPLAP00000009148	ENSPLAP00000031169	FAST kinase domains 3.	Archaelysin family metallopeptidase 2.	0.588
LOC106945096	dnajc12	ENSPLAP00000009148	ENSPLAP00000022746	FAST kinase domains 3.	DnaJ (Hsp40) homolog, subfamily C, member 12.	0.679
LOC106945096	rdm1	ENSPLAP00000009148	ENSPLAP00000001942	FAST kinase domains 3.	Zgc:103564.	0.672
LOC106964456	rdm1	ENSPLAP00000024932	ENSPLAP00000001942	Ig-like domain-containing protein.	Zgc:103564.	0.721
daw1	ENSPLAP00000015739	ENSPLAP00000025412	ENSPLAP00000015739	WD_REPEATS_REGION domain-containing protein.	Transmembrane protein 72.	0.510
daw1	rdm1	ENSPLAP00000025412	ENSPLAP00000001942	WD_REPEATS_REGION domain-containing protein.	Zgc:103564.	0.550
dnajc12	AMZ2	ENSPLAP00000022746	ENSPLAP00000031169	DnaJ (Hsp40) homolog, subfamily C, member 12.	Archaelysin family metallopeptidase 2.	0.637
dnajc12	LOC106945096	ENSPLAP00000022746	ENSPLAP00000009148	DnaJ (Hsp40) homolog, subfamily C, member 12.	FAST kinase domains 3.	0.679
dnajc12	rdm1	ENSPLAP00000022746	ENSPLAP00000001942	DnaJ (Hsp40) homolog, subfamily C, member 12.	Zgc:103564.	0.686
pi4kb	LOC106941236	ENSPLAP00000016124	ENSPLAP00000021948	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.901
pi4kb	rdm1	ENSPLAP00000016124	ENSPLAP00000001942	Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.	Zgc:103564.	0.627
rad52	rdm1	ENSPLAP00000021876	ENSPLAP00000001942	RAD52 homolog, DNA repair protein.	Zgc:103564.	0.734
rdm1	AMZ2	ENSPLAP00000001942	ENSPLAP00000031169	Zgc:103564.	Archaelysin family metallopeptidase 2.	0.629