Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klhl20Kelch-like family member 20. (609 aa)    
Predicted Functional Partners:
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.978
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.978
LOC106942524-2
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.907
ENSPLAP00000023112
WD_REPEATS_REGION domain-containing protein.
    
 
 0.907
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.872
klhl26
Kelch-like family member 26.
    
  0.833
ENSPLAP00000000035
Uncharacterized protein.
    
 0.825
ENSPLAP00000006150
GSAP-16 domain-containing protein.
    
 0.825
fbxl17
F-box and leucine-rich repeat protein 17.
    
  0.805
nudcd3
NudC domain containing 3.
   
 
 0.802
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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