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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slmapSarcolemma associated protein a. (886 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.969
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.965
LOC106950570
MOB family member 4, phocein.
    
 
 0.956
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.935
strip1
Striatin interacting protein 1.
    
 
 0.904
strip2
Striatin interacting protein 2.
    
 
 0.904
ENSPLAP00000020292
Uncharacterized protein.
    
 0.853
sike1
Suppressor of IKBKE 1.
    
 
 0.821
LOC106941149
Serine/threonine-protein phosphatase.
    
 0.818
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.818
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.