Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slmapSarcolemma associated protein a. (886 aa)    
Predicted Functional Partners:
pdcd10
Programmed cell death 10b.
    
 
 0.980
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.971
LOC106950570
MOB family member 4, phocein.
    
 
 0.955
strip1
Striatin interacting protein 1.
    
 
 0.927
strip2
Striatin interacting protein 2.
    
 
 0.927
LOC106960967
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.923
strn3
Striatin, calmodulin binding protein 3.
   
 
 0.880
strn4
Striatin, calmodulin binding protein 4.
   
 
 0.880
STRN
Striatin.
   
 
 0.880
LOC106939713
Striatin, calmodulin binding protein.
   
 
 0.880
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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