STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ewsr1EWS RNA-binding protein 1b. (602 aa)    
Predicted Functional Partners:
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
0.946
tardbp
TAR DNA binding protein, like.
   
 0.842
LOC106941185
TAR DNA-binding protein 43-like.
   
 0.842
LOC106936586
TAR DNA binding protein.
   
 0.842
LOC106954507
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.834
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.834
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.831
cirbp
Cold inducible RNA binding protein b.
   
 0.826
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.802
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.772
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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