Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
ewsr1EWS RNA-binding protein 1b. (602 aa)    
Predicted Functional Partners:
LOC106937209
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.975
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.957
hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 0.940
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.923
tardbp
TAR DNA binding protein, like.
   
 0.922
LOC106941185
TAR DNA-binding protein 43-like.
   
 0.922
LOC106936586
TAR DNA binding protein.
   
 0.922
hnrnpu
Heterogeneous nuclear ribonucleoprotein Ub.
   
 0.920
HNRNPUL1
Heterogeneous nuclear ribonucleoprotein U like 1.
   
 0.920
ENSPLAP00000013662
E1A binding protein p300 b.
   
 
 0.882
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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