Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000001985Phosphatase and actin regulator. (117 aa)    
Predicted Functional Partners:
tbl2
Transducin (beta)-like 2.
      
 0.629
LOC106959661
Uncharacterized protein.
 
      0.616
tmod3
Tropomodulin 2.
    
   0.585
ENSPLAP00000008896
SLIT and NTRK-like family, member 6.
      
 0.551
vax2
Ventral anterior homeobox 2.
      
 0.521
tmem252
Uncharacterized protein.
      
 0.521
HOMER2
Homer scaffold protein 2.
    
   0.519
HOMER1
Homer scaffold protein 1.
    
   0.519
plagl2
Pleiomorphic adenoma gene-like 2.
    
 
 0.454
plag1
Pleiomorphic adenoma gene 1.
    
 
 0.454
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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