Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nefhIF rod domain-containing protein; Belongs to the intermediate filament family. (741 aa)    
Predicted Functional Partners:
ENSPLAP00000003207
Tubulin domain-containing protein.
    
 0.615
LOC106947909
Un-named hu7910.
     
 0.581
LOC106937741
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.571
LOC106963691
ZP domain-containing protein.
    
 0.570
ENSPLAP00000012548
ZP domain-containing protein.
    
 0.570
emc10
ER membrane protein complex subunit 10.
    
 
 0.570
ENSPLAP00000009052
ANF_receptor domain-containing protein.
   
  0.569
grin1
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
  0.569
ENSPLAP00000008423
BTB domain-containing protein.
    
 
 0.566
chdh
Choline dehydrogenase.
      
 0.539
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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