SNX7 protein (Poecilia latipinna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

SNX7

Sorting nexin 7. (414 aa)

Predicted Functional Partners:

vps35

0.891

ENSPLAP00000015336

0.888

bloc1s2

0.857

SNX4

0.854

LOC106961418

0.854

snx6

0.764

snx5

0.764

dtnbp1

0.747

mecr

0.745

vamp2

0.726

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000015336	LOC106961418	ENSPLAP00000015336	ENSPLAP00000017551	Uncharacterized protein.	PX domain-containing protein.	0.546
ENSPLAP00000015336	SNX4	ENSPLAP00000015336	ENSPLAP00000000926	Uncharacterized protein.	Sorting nexin 4.	0.543
ENSPLAP00000015336	SNX7	ENSPLAP00000015336	ENSPLAP00000001998	Uncharacterized protein.	Sorting nexin 7.	0.888
ENSPLAP00000015336	bloc1s2	ENSPLAP00000015336	ENSPLAP00000002143	Uncharacterized protein.	Biogenesis of lysosomal organelles complex-1, subunit 2.	0.516
ENSPLAP00000015336	dtnbp1	ENSPLAP00000015336	ENSPLAP00000015188	Uncharacterized protein.	Dystrobrevin binding protein 1b.	0.402
ENSPLAP00000015336	mecr	ENSPLAP00000015336	ENSPLAP00000016616	Uncharacterized protein.	Mitochondrial trans-2-enoyl-CoA reductase.	0.619
ENSPLAP00000015336	snx5	ENSPLAP00000015336	ENSPLAP00000003949	Uncharacterized protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.861
ENSPLAP00000015336	snx6	ENSPLAP00000015336	ENSPLAP00000002260	Uncharacterized protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.853
ENSPLAP00000015336	vamp2	ENSPLAP00000015336	ENSPLAP00000005580	Uncharacterized protein.	Vesicle-associated membrane protein 2.	0.461
ENSPLAP00000015336	vps35	ENSPLAP00000015336	ENSPLAP00000010614	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.751
LOC106961418	ENSPLAP00000015336	ENSPLAP00000017551	ENSPLAP00000015336	PX domain-containing protein.	Uncharacterized protein.	0.546
LOC106961418	SNX4	ENSPLAP00000017551	ENSPLAP00000000926	PX domain-containing protein.	Sorting nexin 4.	0.901
LOC106961418	SNX7	ENSPLAP00000017551	ENSPLAP00000001998	PX domain-containing protein.	Sorting nexin 7.	0.854
LOC106961418	bloc1s2	ENSPLAP00000017551	ENSPLAP00000002143	PX domain-containing protein.	Biogenesis of lysosomal organelles complex-1, subunit 2.	0.516
LOC106961418	dtnbp1	ENSPLAP00000017551	ENSPLAP00000015188	PX domain-containing protein.	Dystrobrevin binding protein 1b.	0.402
LOC106961418	mecr	ENSPLAP00000017551	ENSPLAP00000016616	PX domain-containing protein.	Mitochondrial trans-2-enoyl-CoA reductase.	0.619
LOC106961418	snx5	ENSPLAP00000017551	ENSPLAP00000003949	PX domain-containing protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.861
LOC106961418	snx6	ENSPLAP00000017551	ENSPLAP00000002260	PX domain-containing protein.	Sorting nexin; Involved in several stages of intracellular trafficking.	0.853
LOC106961418	vamp2	ENSPLAP00000017551	ENSPLAP00000005580	PX domain-containing protein.	Vesicle-associated membrane protein 2.	0.461
LOC106961418	vps35	ENSPLAP00000017551	ENSPLAP00000010614	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.751