STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002007C-type lectin domain-containing protein. (163 aa)    
Predicted Functional Partners:
LOC106947211
Zmp:0000000846.
    
  0.564
tnn
Tenascin N.
    
  0.564
ENSPLAP00000022184
Uncharacterized protein.
    
  0.564
ENSPLAP00000023646
Fibronectin type-III domain-containing protein.
    
  0.564
tnr
Tenascin R (restrictin, janusin).
    
  0.564
LOC106936774
Tenascin C.
    
  0.564
ADAMTS5
ADAM metallopeptidase with thrombospondin type 1 motif 5.
    
 0.496
LOC106952574
Si:dkey-26c10.5.
    
  0.401
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.