Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prxl2cPeroxiredoxin like 2C. (225 aa)    
Predicted Functional Partners:
fbxl17
F-box and leucine-rich repeat protein 17.
      
 0.708
znf367
Zinc finger protein 367.
      
 0.682
LOC106948518
SET and MYND domain containing 1b.
      
 0.667
ubox5
U-box domain containing 5.
      
 0.664
fabp1
Fatty acid binding protein 1b, tandem duplicate 1.
      
 0.643
selenos
Selenoprotein S.
      
 0.623
LOC106941887
Selenoprotein J.
      
 0.593
LOC106941579
Crystallin J1A-like.
      
 0.593
ENSPLAP00000029114
Uncharacterized protein.
      
 0.593
ENSPLAP00000007019
Uncharacterized protein.
      
 0.569
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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