Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fam189bSi:dkey-7f3.9. (655 aa)    
Predicted Functional Partners:
wwox
WW domain containing oxidoreductase.
    
 
 0.940
ankrd13d
Ankyrin repeat domain 13 family, member D.
    
   0.784
cuedc1
CUE domain containing 1b.
    
   0.759
LOC106952138
E3 ubiquitin-protein ligase.
    
 0.717
ENSPLAP00000026412
Uncharacterized protein.
    
 0.717
ENSPLAP00000026430
HECT domain-containing protein.
    
 0.717
synrg
Synergin, gamma.
    
 0.700
LOC106946505
Nedd4 family interacting protein 2.
      
 0.672
exoc4
Exocyst complex component 4.
    
 0.654
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.633
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.