STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zfand4Zinc finger, AN1-type domain 4. (723 aa)    
Predicted Functional Partners:
LOC106952860
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.999
rps27a
Ribosomal protein S27a.
   
 
0.999
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.998
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.997
ubxn7
UBX domain protein 7.
    
 0.997
fancm
Uncharacterized protein.
   
 0.996
psma2
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
   
 0.996
psmc1
Proteasome 26S subunit, ATPase 1b; Belongs to the AAA ATPase family.
   
 0.996
psma4
Proteasome subunit alpha type.
   
 0.996
psmc5
Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.
    
 0.996
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.