ENSPLAP00000002096 protein (Poecilia latipinna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPLAP00000002096

SCY domain-containing protein. (93 aa)

Predicted Functional Partners:

ENSPLAP00000028635

0.508

LOC106961326

0.507

ENSPLAP00000018813

0.505

prim2

0.428

ENSPLAP00000001429

0.422

ENSPLAP00000000021

0.412

ENSPLAP00000017690

0.412

Your Current Organism:

Poecilia latipinna

NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPLAP00000000021	ENSPLAP00000002096	ENSPLAP00000000021	ENSPLAP00000002096	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	SCY domain-containing protein.	0.412
ENSPLAP00000001429	ENSPLAP00000002096	ENSPLAP00000001429	ENSPLAP00000002096	Uncharacterized protein.	SCY domain-containing protein.	0.422
ENSPLAP00000002096	ENSPLAP00000000021	ENSPLAP00000002096	ENSPLAP00000000021	SCY domain-containing protein.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.412
ENSPLAP00000002096	ENSPLAP00000001429	ENSPLAP00000002096	ENSPLAP00000001429	SCY domain-containing protein.	Uncharacterized protein.	0.422
ENSPLAP00000002096	ENSPLAP00000017690	ENSPLAP00000002096	ENSPLAP00000017690	SCY domain-containing protein.	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	0.412
ENSPLAP00000002096	ENSPLAP00000018813	ENSPLAP00000002096	ENSPLAP00000018813	SCY domain-containing protein.	SH2 domain-containing protein.	0.505
ENSPLAP00000002096	ENSPLAP00000028635	ENSPLAP00000002096	ENSPLAP00000028635	SCY domain-containing protein.	Cysteine three histidine 1.	0.508
ENSPLAP00000002096	LOC106961326	ENSPLAP00000002096	ENSPLAP00000014394	SCY domain-containing protein.	Tetraspanin.	0.507
ENSPLAP00000002096	prim2	ENSPLAP00000002096	ENSPLAP00000008980	SCY domain-containing protein.	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	0.428
ENSPLAP00000017690	ENSPLAP00000002096	ENSPLAP00000017690	ENSPLAP00000002096	Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.	SCY domain-containing protein.	0.412
ENSPLAP00000018813	ENSPLAP00000002096	ENSPLAP00000018813	ENSPLAP00000002096	SH2 domain-containing protein.	SCY domain-containing protein.	0.505
ENSPLAP00000028635	ENSPLAP00000002096	ENSPLAP00000028635	ENSPLAP00000002096	Cysteine three histidine 1.	SCY domain-containing protein.	0.508
ENSPLAP00000028635	LOC106961326	ENSPLAP00000028635	ENSPLAP00000014394	Cysteine three histidine 1.	Tetraspanin.	0.414
ENSPLAP00000028635	prim2	ENSPLAP00000028635	ENSPLAP00000008980	Cysteine three histidine 1.	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	0.412
LOC106961326	ENSPLAP00000002096	ENSPLAP00000014394	ENSPLAP00000002096	Tetraspanin.	SCY domain-containing protein.	0.507
LOC106961326	ENSPLAP00000028635	ENSPLAP00000014394	ENSPLAP00000028635	Tetraspanin.	Cysteine three histidine 1.	0.414
LOC106961326	prim2	ENSPLAP00000014394	ENSPLAP00000008980	Tetraspanin.	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	0.412
prim2	ENSPLAP00000002096	ENSPLAP00000008980	ENSPLAP00000002096	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	SCY domain-containing protein.	0.428
prim2	ENSPLAP00000028635	ENSPLAP00000008980	ENSPLAP00000028635	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	Cysteine three histidine 1.	0.412
prim2	LOC106961326	ENSPLAP00000008980	ENSPLAP00000014394	DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.	Tetraspanin.	0.412