Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (923 aa)    
Predicted Functional Partners:
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.681
stbd1
CBM20 domain-containing protein.
      
 0.643
extl3
Exostosin-like glycosyltransferase 3; Belongs to the glycosyltransferase 47 family.
      
 0.643
tmf1
TATA element modulatory factor 1.
     
 0.631
golga2
Golgin A2.
    
 0.576
ENSPLAP00000014192
NDK domain-containing protein.
   
   0.563
gcc1
GRIP and coiled-coil domain containing 1.
     
 0.559
wdr90
WD repeat domain 90.
   
 0.553
ENSPLAP00000028491
Malate dehydrogenase.
    
 0.548
ap4b1
Adaptor related protein complex 4 subunit beta 1.
    
 
 0.545
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.