STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (923 aa)    
Predicted Functional Partners:
tmf1
TATA element modulatory factor 1.
     
 0.599
espl1
Extra spindle pole bodies like 1, separase.
    
 0.596
gcc1
GRIP and coiled-coil domain containing 1.
     
 0.586
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.578
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.564
ENSPLAP00000003534
Zinc finger and BTB domain containing 33.
  
 
  0.546
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 0.546
pidd1
P53-induced death domain protein 1.
    
  0.545
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.543
ENSPLAP00000028939
Receptor-interacting serine-threonine kinase 3; Belongs to the protein kinase superfamily.
    
 0.543
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.