Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ENSPLAP00000002114Potassium channel tetramerization domain containing 16b. (308 aa)    
Predicted Functional Partners:
LOC106937213
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.676
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.676
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
  0.604
cul1
Cullin 1b; Belongs to the cullin family.
    
 0.532
ube2f
Ubiquitin-conjugating enzyme E2F (putative); Belongs to the ubiquitin-conjugating enzyme family.
    
  0.520
ube2m
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.520
ccdc22
Coiled-coil domain containing 22.
     
  0.519
LOC106956567
COMM domain containing 4.
     
  0.519
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
   
 0.517
LOC106957958
COMM domain containing 5.
     
  0.512
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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