Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wdcpWD repeat and coiled coil containing. (743 aa)    
Predicted Functional Partners:
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
   0.961
ruvbl1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
   0.959
nudcd1
NudC domain containing 1.
    
   0.880
gnl1
Guanine nucleotide binding protein-like 1.
    
   0.756
ENSPLAP00000009437
PLAC domain-containing protein.
    
   0.505
ENSPLAP00000025309
Uncharacterized protein.
    
   0.505
lsg1
Large 60S subunit nuclear export GTPase 1.
    
   0.467
capn15
Calpain 15; Belongs to the peptidase C2 family.
      
 0.427
eef1g
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
     
  0.413
ENSPLAP00000008509
Ephrin-B3a.
  
     0.408
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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