Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1035 aa)    
Predicted Functional Partners:
baz1b
Bromodomain adjacent to zinc finger domain, 1B.
   
 0.999
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.992
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.990
rsf1
PHD-type domain-containing protein.
   
 0.988
LOC106962404
Remodeling and spacing factor 1b, tandem duplicate 1.
   
 0.988
cecr2
Bromo domain-containing protein.
    
 0.986
chrac1
Chromatin accessibility complex subunit 1.
    
 0.984
mybbp1a
MYB binding protein (P160) 1a.
   
 0.983
sf3b1
Splicing factor 3b, subunit 1.
   
  0.982
ddx21
DEAD (Asp-Glu-Ala-Asp) box helicase 21.
  
 0.972
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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