Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPLAP00000002129Opsin 8, group member b; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily. (340 aa)    
Predicted Functional Partners:
STK32C
Serine/threonine kinase 32C.
      
 0.712
slc9a8
Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.
      
 0.707
GNAZ
G protein subunit alpha z.
    
 0.659
LOC106959862
WD_REPEATS_REGION domain-containing protein.
    
 0.577
LOC106936595
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
    
 0.577
GNB4
G protein subunit beta 4.
    
 0.577
LOC106936826
WD_REPEATS_REGION domain-containing protein.
    
 0.577
gnb2
Guanine nucleotide binding protein (G protein), beta polypeptide 2.
    
 0.577
ENSPLAP00000018936
Uncharacterized protein.
    
 0.577
gnb1
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
    
 0.577
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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