Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC106954539Uncharacterized protein. (1476 aa)    
Predicted Functional Partners:
LOC106954976
Mitogen-activated protein kinase.
    
   0.791
aspm
Abnormal spindle microtubule assembly.
    
 
 0.677
cep63
Centrosomal protein 63.
    
 
 0.579
cenpj
Centromere protein J.
      
 0.562
LOC106962379
Mitogen-activated protein kinase 8b.
    
   0.551
LOC106944787
Mitogen-activated protein kinase.
    
   0.551
mapk10
Mitogen-activated protein kinase.
    
   0.551
LOC106954348
STIL centriolar assembly protein.
   
  
 0.543
LOC106940361
Centrosomal protein 170B.
    
 
 0.513
ENSPLAP00000010603
FHA domain-containing protein.
    
 
 0.513
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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