STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106953214Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
LOC106939213
Uncharacterized protein.
 
      0.769
LOC106963208
Nanos homolog 1; Belongs to the nanos family.
    
 
 0.578
ENSPLAP00000030959
Nanos-type domain-containing protein; Belongs to the nanos family.
    
 
 0.578
LOC106935707
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.513
LOC106936765
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
   0.513
LOC106936767
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 2; Belongs to the 14-3-3 family.
    
   0.513
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 
 0.419
nanos3
Nanos homolog 3; Belongs to the nanos family.
    
 
 0.417
NANOS2
Nanos C2HC-type zinc finger 2; Belongs to the nanos family.
    
 
 0.417
carhsp1
Calcium regulated heat stable protein 1.
    
 
 0.416
Your Current Organism:
Poecilia latipinna
NCBI taxonomy Id: 48699
Other names: Mollienesia latipinna, P. latipinna, sailfin molly
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